PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022146644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 281aa MW: 32832.2 Da PI: 6.5869 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.5 | 6.5e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g++KK +ELSvLCda++ +i+fss+gk +ey+s XP_022146644.1 9 KRIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIGLIVFSSNGKCFEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 60.3 | 7.6e-21 | 90 | 178 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + e+l +++k++ke+e+Lq + ++ GedL+ ++l++L ++ ++L++sl+++R++K+el+ +q+++l++kek l++en+++ ++++e XP_022146644.1 90 PDPEELASQIRKMRKETEELQVRLQRYTGEDLSAIQLRDLDEMDHRLQNSLNRVRARKSELFQQQMDNLKRKEKILEDENEQIYHMIKE 178 56688999***************************************************************************999986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 281 aa Download sequence |
MGRGKIAIKR IENRTTRQVT FSKRRAGLFK KTHELSVLCD AQIGLIVFSS NGKCFEYCSQ 60 PTCMDQIIKR YQISLAGSRA PDRLHDGNDP DPEELASQIR KMRKETEELQ VRLQRYTGED 120 LSAIQLRDLD EMDHRLQNSL NRVRARKSEL FQQQMDNLKR KEKILEDENE QIYHMIKEQQ 180 MAAAMMQKSE EEQMMSSHVD MNQQHQQMHD FIPFPLHPQL QLQVQVQQAD QDHEADEPSS 240 VLQLAPLQPP PSPFHPFRLQ LQPIQPNLQD FNLHSSTTTY E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G23260.2 | 5e-53 | MIKC_MADS family protein |