PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146452.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family BBR-BPC
Protein Properties Length: 278aa    MW: 30935.4 Da    PI: 10.1797
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind337.14.5e-10312781301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k nlglqlms+i+erd k     r+  + + + ++ +++rd         m++  rd++ +         ++++l
  XP_022146452.1   1 MDDDALNMRNWGYYEPS--FKGNLGLQLMSTITERDMKHflpgRDPSV-MVNANGLFHPRDcvvseapvpMNY-VRDNWGNP--------RDRFL 83 
                     9***9999*******99..*******************99*9999999.9***********999999999999.99999999........6799* PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+++++        + vl++t+ ++slq      l+ ++     ++++ a  +e +++++ke  k kkrq+++ pk++kakk++k +    k+
  XP_022146452.1  84 NMLPANHN--------YPVLPETSGAHSLQI-----LQAPSSS---RDEIAASRVE-EPPVKKEGGKAKKRQSEAGPKTPKAKKPRK-P----KD 156
                     ****9997........889********9999.....3333333...3334455544.477888888888899999999999999998.2....22 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++++   +r+k +kk+idlv+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRiagrKmSqgafkk+LekL
  XP_022146452.1 157 NNAAV--QRVKPPKKNIDLVINGIDMDISGIPIPVCSCTGAPHQCYRWGCGGWQSACCTTNISTYPLPMSDKRRGARIAGRKMSQGAFKKVLEKL 249
                     33334..689************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aa+Gy+++np+DL++hWA+HGtnkfvtir
  XP_022146452.1 250 AADGYNFANPIDLRTHWARHGTNKFVTIR 278
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG NLGLQLMSTI TERDMKHFLP GRDPSVMVNA NGLFHPRDCV  60
VSEAPVPMNY VRDNWGNPRD RFLNMLPANH NYPVLPETSG AHSLQILQAP SSSRDEIAAS  120
RVEEPPVKKE GGKAKKRQSE AGPKTPKAKK PRKPKDNNAA VQRVKPPKKN IDLVINGIDM  180
DISGIPIPVC SCTGAPHQCY RWGCGGWQSA CCTTNISTYP LPMSDKRRGA RIAGRKMSQG  240
AFKKVLEKLA ADGYNFANPI DLRTHWARHG TNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-108BBR-BPC family protein