PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022146006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24554.5 Da PI: 5.0666 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 83 | 133 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + + r++lg+f++ae Aa a+++a+ +++g XP_022146006.1 83 SYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFSMRG 133 69*******.**********422...25*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
METSYFSFSD SDFSTESSFG SSEMESSFSW SEIFSIHGSL AFPDDFLGSQ TSGTESKIVV 60 KEEIEVSSTD FEEEKQRKTP EKSYRGVRRR PWGKYAAEIR DSTRHGVRVW LGTFDSAEAA 120 ALAYDQAAFS MRGSMAVLNF PVEMVRESLQ DIKYQLEEGC SPVVALKRKH SLRRKSAAAA 180 VEKKKKIKKT NNVMILEDLG TEYLEELLML SSCESSLN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 167 | 186 | KRKHSLRRKSAAAAVEKKKK |
2 | 167 | 189 | KRKHSLRRKSAAAAVEKKKKIKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-45 | ERF family protein |