PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146001.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 361aa    MW: 39013.8 Da    PI: 7.8256
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-17106156256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ ++e Aa a++ a+ kl+ge
  XP_022146001.1 106 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYESPEAAAYAYDCAAYKLRGE 156
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MEMMNTASLP FGLTDVSDVT ATLSNLILTG GGNTTLDSIF SHCGNFVGGA LDQGIGGSSV  60
YLRQRELLQR FSQDRKVNGS RDLFSRAYEL LYSRSAAVGG GGEKKLYRGV RQRHWGKWVA  120
EIRLPQNRMR VWLGTYESPE AAAYAYDCAA YKLRGEYARL NFPNLKDLKN DLGSGEFARL  180
SGLKKLVDAK IQSIFQKIRK GKGKKTAKKN DSRRTGGDLG SASCSSSSSL SLSPPPVGQL  240
TDDWSWEMVS ASASSSLSMS PPPVGQLTDD WSWEMVSASA SSSLSMSPPP VGQLTDEWSW  300
KIGSAAAAEE GVWSCFENSP RAVSVDTSTT ATAAAGSETE CYSLAKMPSY DAELIWEVLA  360
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-44ERF family protein