PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022145971.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 332aa    MW: 38407.4 Da    PI: 4.9872
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022145971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.61.9e-33451362102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k++ei++d++++++isw ++g sf+v+d++ f+ ++Lp++F h+nf+SF+RQLn+YgF+k++ e+         weF+++ F +g+k+ll++
  XP_022145971.1  45 FLIKTFEIVDDPSTDHVISWGREGVSFIVWDPKAFSANLLPRFFNHNNFSSFIRQLNTYGFRKINPER---------WEFANEGFLRGQKHLLRT 130
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_022145971.1 131 IRRRKP 136
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MNPQYPVKEE NWGPSSPEAG GGYGSSATPT PEPMEGLYEV GPPPFLIKTF EIVDDPSTDH  60
VISWGREGVS FIVWDPKAFS ANLLPRFFNH NNFSSFIRQL NTYGFRKINP ERWEFANEGF  120
LRGQKHLLRT IRRRKPPSSE PLPMEQEAGP SVELGRFRLD AELNQLKRDK QVVMMELVKL  180
RHEQQNTRTY LKAMEQKLQG TEMKQRQMMK FMARAIQNPG FIHQLVQQKK KRDIEEAATK  240
KRRWPIDQGP SSSRGSEGIS NPIKIEPLEI CGYEISELEA LALEMQGLGK AMKKEREVKE  300
ELQPSESGDT ELDEEFWEEF FSERTDEEEE EE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229243KKKRDIEEAATKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-107HSF family protein