PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145733.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 549aa MW: 61211.3 Da PI: 9.112

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	4e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ede l +av+ + g++Wk+Ia+++ R++ qc +rwqk+l XP_022145733.1 59 KGGWTPQEDETLRNAVAAFKGKNWKKIAEYFH-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	62.1	1.1e-19	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v ++G+ W++Ia+ ++ gR +kqc++rw+++l XP_022145733.1 111 KGPWTQEEDDKIIELVSKYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	55.5	1.3e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++++G++ W+ Iar ++ gRt++ +k++w++ XP_022145733.1 163 KDAWTLEEELALMNAHRLHGNK-WAEIARVLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MEEAKQEECC LENKQSTAAT SSSVSEGSAS ATAKSPGMCS PASTSPSHRR TSGPIRRAKG 60 GWTPQEDETL RNAVAAFKGK NWKKIAEYFH DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KIIELVSKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRL 180 HGNKWAEIAR VLPGRTDNAI KNHWNSSLKK KLDFYLATGK LPPVAKNSSQ NGARDTTRTP 240 PTKNFLPYSS KGSDSTAQTS SGNTDFHKLD ESSKDQIESS APPDEDMVAS TSGYLNESAD 300 SRHVKCWPGP LNVMDPRYRK SGSARKNGTK TRGESDYEIS KLDEDKVTRT PLRLESPKYG 360 SLYYEPPRLE SRVPVDSELL SMYMHETNNS SITSPIGIFT PPCVKTRDLS LHSPESILRI 420 AARSFPSTPS ILRKRKTETR ICLPPKQMQE GETETINNVS QESGQEETLN NSGSMMDSPN 480 GSLCESPSNN DHSPSRSNSK AFNASPPYRL ISKRTAISKS VEKQLEFAFD KEMNNHTIKS 540 VESNGISSR

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MEEAKQEECC LENKQSTAAT SSSVSEGSAS ATAKSPGMCS PASTSPSHRR TSGPIRRAKG  60
GWTPQEDETL RNAVAAFKGK NWKKIAEYFH DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD  120
KIIELVSKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRL  180
HGNKWAEIAR VLPGRTDNAI KNHWNSSLKK KLDFYLATGK LPPVAKNSSQ NGARDTTRTP  240
PTKNFLPYSS KGSDSTAQTS SGNTDFHKLD ESSKDQIESS APPDEDMVAS TSGYLNESAD  300
SRHVKCWPGP LNVMDPRYRK SGSARKNGTK TRGESDYEIS KLDEDKVTRT PLRLESPKYG  360
SLYYEPPRLE SRVPVDSELL SMYMHETNNS SITSPIGIFT PPCVKTRDLS LHSPESILRI  420
AARSFPSTPS ILRKRKTETR ICLPPKQMQE GETETINNVS QESGQEETLN NSGSMMDSPN  480
GSLCESPSNN DHSPSRSNSK AFNASPPYRL ISKRTAISKS VEKQLEFAFD KEMNNHTIKS  540
VESNGISSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-156	MYB family protein