PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145656.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 244aa MW: 27274.8 Da PI: 10.1384

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.4	1.4e-07	15	61	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT+eE +++ +a + + + +W ++a++++ g+t +++ ++++ XP_022145656.1 15 KWTPEENKRFENALAWFDRDtpdRWLKVAAMIP-GKTVGDVIKQYRDL 61 7***************99*********.******999976 PP
2	Myb_DNA-binding	48.1	2.8e-15	121	165	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky XP_022145656.1 121 PWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 165 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MKRGIGIFSP TSPAKWTPEE NKRFENALAW FDRDTPDRWL KVAAMIPGKT VGDVIKQYRD 60 LVEDVSDIEA GLIPIPGYAG GNSFVLEWSN GGGGFGRIHG GAGKRGGSGR PSDQDRKKGV 120 PWTEEEHRLF LMGLKKYGKG DWRNISRNFV TTRTPTQVAS HAQKYFIRQL TGGKDKRRSS 180 IHDITTVHLP DNDNHNPLHQ TSPRPFCGMS SLGPKLLPDQ IYGCQNVGPY NTNVLQVQRE 240 QHQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	3e-91	MYB family protein