PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022145240.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

DBB

Protein Properties

Length: 236aa MW: 26094.7 Da PI: 4.9071

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022145240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ XP_022145240.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	28.5	3.2e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ +++k + +fC +++ l+C+dC + +H+ H XP_022145240.1 53 KLPKCDICQDKAAFIFCVEDRALFCQDCDEPIHSTgslsanH 94 5799*****************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL STKLPKCDIC 60 QDKAAFIFCV EDRALFCQDC DEPIHSTGSL SANHQRFLAT GIRVAMSSSC SKDVDKVKME 120 PPNPKNPQVP AKMPSQQVPN FTSPWAVDDF LHFSDLESSD KKEHLEFGEL EWLAEMGLFG 180 EQVPQEALAA AEVPEIRTSH SGSAISYRPT KSSTSYKKPR IEMPDEEEFF TVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	1e-102	DBB family protein