PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022145130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB_related | ||||||||
Protein Properties | Length: 220aa MW: 24781.8 Da PI: 5.0901 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.8e-15 | 104 | 148 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rWT++E+ l++ + +++G+g+Wk Ia ++ +Rt q+ s+ qky XP_022145130.1 104 RWTKDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKY 148 9*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MEEQLPPLLS LDDWDIDGFY NETMPLPSAP APAPEVRQEM QFPVELVNSD NNPSPMVLLE 60 LSSDDDVAET TTTNVLLSDV SSAVNLPERP GAEEAGSGNL PVRRWTKDEH MLFLMGLEKY 120 GNGNWKEIAT EFVVTRTSTQ VASHAQKYCK YRQNPNINQR NGKSCRSKSS IFDITAVDPH 180 SRVRLLRRRR APAAIQPPLP PLQVQQFTIT NYYPPPHQQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 8e-21 | MYB family protein |