PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144850.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 480aa MW: 53623.9 Da PI: 7.2152

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.6	5.2e-36	48	190	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_022144850.1 48 LPAGVKFDPTDQELI-EHLEAKVKAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVSRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 140 799**********.99*****5553334444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022144850.1 141 ETRWHKTGKTRPVMA-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 190 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MRNSSKFGSI SGSDSIIDAK LEQHQMCGSK HCPGCGHKLE GRPDWVGLPA GVKFDPTDQE 60 LIEHLEAKVK AKDMKSHPLI DEFIPTIEGE DGICYTHPEK LPGVSRDGLS RHFFHRPSKA 120 YTTGTRKRRK IQTECDLQGG ETRWHKTGKT RPVMANGKQK GCKKILVLYT NFGKNRKPEK 180 TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSER SVAAAEGSFE VPNMGRREST 240 TASAPTDEIL SPAGGVGASI SSFSSLDIQH HLKSDHFGFA PFRTSFDESV LSQMGMEEAS 300 TERKMAKAPT GTGACSSNAE FEMREQSSRA AAAGVELDHQ HHHHQSLMVA HDHHRHSVVH 360 HHLPTTGFHV THQISTIISP PPPPLLHHTS IVDSYHDHHS RIIIHNEQHF QQEAAEAEHH 420 KLGARSASGL EELIMGCTSS NSSIKQPLPQ ESSMNSRETE WMKYSSFWPD PDNPNIHGHG

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MRNSSKFGSI SGSDSIIDAK LEQHQMCGSK HCPGCGHKLE GRPDWVGLPA GVKFDPTDQE  60
LIEHLEAKVK AKDMKSHPLI DEFIPTIEGE DGICYTHPEK LPGVSRDGLS RHFFHRPSKA  120
YTTGTRKRRK IQTECDLQGG ETRWHKTGKT RPVMANGKQK GCKKILVLYT NFGKNRKPEK  180
TNWVMHQYHL GQHEEEKEGE LVVSKIFYQT QPRQCNWSER SVAAAEGSFE VPNMGRREST  240
TASAPTDEIL SPAGGVGASI SSFSSLDIQH HLKSDHFGFA PFRTSFDESV LSQMGMEEAS  300
TERKMAKAPT GTGACSSNAE FEMREQSSRA AAAGVELDHQ HHHHQSLMVA HDHHRHSVVH  360
HHLPTTGFHV THQISTIISP PPPPLLHHTS IVDSYHDHHS RIIIHNEQHF QQEAAEAEHH  420
KLGARSASGL EELIMGCTSS NSSIKQPLPQ ESSMNSRETE WMKYSSFWPD PDNPNIHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-137	NAC family protein