PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022144756.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 19722.7 Da PI: 4.6832 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 8 | 58 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ + +Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+++l+g XP_022144756.1 8 PVYRGVRRRN-TSKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAALALKG 58 68*****887.9*********94....478***********************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 184 aa Download sequence |
MASSGRHPVY RGVRRRNTSK WVSEIREPRK PNRIWLGTFP TPEMAAVAYD VAALALKGQD 60 AELNFPNSAS SLPVPASRSP SDIQAAAASA AAALGAAAAA MEAGNSHPRN YSSSGTHYGD 120 VRGARYDQGE SGSEFIDEDL IFDMPNVLMN MAEGMLLSPP RFNVHGGDND DGDDDGDQNL 180 WNFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36450.1 | 1e-47 | ERF family protein |