PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144751.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 317aa    MW: 34308.2 Da    PI: 4.4117
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021290313123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++ F +   L++H +  H
  XP_022144751.1 290 FPCKSCKRAFGSEGALQSHTKAkH 313
                     89*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEFWGAEVKV GEPLLVSPGE EKILHLSQAC LGESRGKGSE PVFLYVKVGN QKLVLGTLSS  60
EKFPQVSFDL VFDKEFELSH NWKNGSVYFT GYTSLLPEEE ESSYTDSEED IPVAAVDNGK  120
PEAQPKKDAK PDASGSKRKV QIVEPNKSGS NSIIDSKKND DTSDEDDDED EDSLDDENAN  180
GGEEDDTDDD ENEFSGDDSD KTDNEESDDS LAEDEQTPKK AEASKKRPLE SANKTPAADK  240
KAKLVTPQKT DGKKVVGHVA TPHPSKQAGK TPAANDQNKQ QTPKSAGGAF PCKSCKRAFG  300
SEGALQSHTK AKHSAEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.23e-37C2H2 family protein