PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144743.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 264aa    MW: 29378.8 Da    PI: 9.5835
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3101.26e-3228133199
                     EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     f+k ltpsdv+k++rlv+pk++ae++              ++  l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+vvF++++
  XP_022144743.1  28 FEKPLTPSDVGKLNRLVIPKQYAEKYfplsgaaatA--ADKGLLLSFEDESGKLWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVVFERHR 120
                     99***************************9888543..347789************************************************755 PP

                     SSEE..EEEEE-S CS
              B3  87 rsefelvvkvfrk 99 
                      ++ +l++++ r+
  XP_022144743.1 121 LDGDRLFIGWKRR 133
                     4999999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MQNNPNPTWI SLRHQPSAMS AADHQPMFEK PLTPSDVGKL NRLVIPKQYA EKYFPLSGAA  60
ATAADKGLLL SFEDESGKLW RFRYSYWNSS QSYVLTKGWS RYVKEKRLDA GDVVVFERHR  120
LDGDRLFIGW KRRSPAAAAA ADGGRSPGVA PPCSRGWTSM FCSGHPYHPS PPPYQSSHPE  180
SSVQSRTVSV GNSKILRLFG VNLECQTNVS EPEPPPSGGG GGFDLSGRND PTRHHSYPHY  240
SPPLPHHMDF TFSQDVKQTK YHQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.18e-62B3 family protein