PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022144619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 266aa MW: 29817.2 Da PI: 7.7612 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.2e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++++G+g +W + +++ g++R++k+c++rw++yl XP_022144619.1 14 KGPWSPEEDAKLKDYIQKHGTGgNWISLPQKSGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.1 | 1e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd l+ ++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022144619.1 69 GDFSEEEDALICNLFATIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 266 aa Download sequence |
MGRTPCCDKA NVKKGPWSPE EDAKLKDYIQ KHGTGGNWIS LPQKSGLKRC GKSCRLRWLN 60 YLRPDIKHGD FSEEEDALIC NLFATIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLMSI 120 NNTNIIPPSH QIKNPPFLHQ HSSTNSSSPS SSSPSSYSYS YSYSDQSSPI WSFSNLDPMI 180 SIFSPNNNNN NNNLVNPTTP LLFPQDQARF NMISPMVQAS CSSNSDGSGE NQSYQEPPLL 240 DYGLEEIKQL ITSTACTNFF FDDQTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G65790.1 | 5e-76 | MYB family protein |