PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144544.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 320aa    MW: 35960.9 Da    PI: 6.3667
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.71.4e-50171452128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                      pGfrFhPtdeelv +yLk+k+++ +l++ e i+++diyk++PwdLpk ++++e+ewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s++
  XP_022144544.1  17 LPGFRFHPTDEELVGFYLKRKIQQLPLSI-ELIRQLDIYKYDPWDLPKLARSGEREWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSAN 110
                     69***************************.89***************9889999***************************************95 PP

             NAM  97 gel...vglkktLvfykgrapkgektdWvmheyrl 128
                     g++   +glkk+Lvfy+gra+k+ ktdW+mhe+rl
  XP_022144544.1 111 GAAkciIGLKKSLVFYRGRASKAFKTDWMMHEFRL 145
                     554566***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEEEMINEEI VGDDVILPGF RFHPTDEELV GFYLKRKIQQ LPLSIELIRQ LDIYKYDPWD  60
LPKLARSGER EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYSAN GAAKCIIGLK  120
KSLVFYRGRA SKAFKTDWMM HEFRLPPAQA QAQAQPIATN VIPPNDSLAI CRIFKKTSTS  180
GAPRGVSSVS CSLPKDEISS YKISTTPSDV MPCNLANSGF DYPEAKLPEL WNDPNEALFS  240
TFPAMDAWEI PKSAALDVDV SSILVNMWSS ASSDLPRTHL GSSSSDPLLH VQRNALLESP  300
LSPSIQYPLT SIWDNLLNHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.11e-88NAC family protein