PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144462.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 413aa MW: 44707.6 Da PI: 7.2956

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.6	4.1e-15	272	331	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022144462.1 272 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 331 57*****************666664478446***********************98 PP
2	AP2	22.6	2.6e-07	374	406	1	36
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 s y+GV+++++ grW A+I + +k +lg+f XP_022144462.1 374 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 406 57**************988532...5*****9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MGSINWLGFS LSPQDQQPPS DHPHGGSVAF NSGDVVSGVC FSDNPPLPSS YAVFEDFNDR 60 HTTHSQDWNS MKDLGSTQSS DFCMLMGTAS CSSESIETQH QPKLENFLGR HSFTDHDAAX 120 YTNVSGNYMF QNCSLQLPSE GSGGGGGGRA SAANNSSSIG LSMIKTWLRN QPAPPQAVGK 180 SDGDHDGALG GLHHGGAITN AHTLSLSMNT GPPQSGSAAL PLLTANGGGS GGESSSSDNK 240 QPKSTATDVD GENGTVEAVP RKSVDTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ 300 TRKGRQVYLG GYDKEEKAAR AYDLAALKYW GTTTTTNFPI SDYEKEVEDM KHMTRQEFVA 360 SLRRKSSGFS RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSESI NFY

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MGSINWLGFS LSPQDQQPPS DHPHGGSVAF NSGDVVSGVC FSDNPPLPSS YAVFEDFNDR  60
HTTHSQDWNS MKDLGSTQSS DFCMLMGTAS CSSESIETQH QPKLENFLGR HSFTDHDAAX  120
YTNVSGNYMF QNCSLQLPSE GSGGGGGGRA SAANNSSSIG LSMIKTWLRN QPAPPQAVGK  180
SDGDHDGALG GLHHGGAITN AHTLSLSMNT GPPQSGSAAL PLLTANGGGS GGESSSSDNK  240
QPKSTATDVD GENGTVEAVP RKSVDTFGQR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ  300
TRKGRQVYLG GYDKEEKAAR AYDLAALKYW GTTTTTNFPI SDYEKEVEDM KHMTRQEFVA  360
SLRRKSSGFS RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSESI NFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-101	AP2 family protein