PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022144460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 176aa MW: 19888.6 Da PI: 10.0973 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.8e-17 | 40 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia +++ gR++k+c++rw++ XP_022144460.1 40 RGHWRPAEDAKLKELVALYGPQNWNLIADKLQ-GRSGKSCRLRWFNQ 85 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 56.6 | 5.8e-18 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022144460.1 92 RRAFTEEEEERLMQAHRLYGNK-WACIARLFP-GRTDNAVKNHWHV 135 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MGCPSSQESC ENGRMISECS DGFLVVGKER DSGQSKLCAR GHWRPAEDAK LKELVALYGP 60 QNWNLIADKL QGRSGKSCRL RWFNQLDPRI NRRAFTEEEE ERLMQAHRLY GNKWACIARL 120 FPGRTDNAVK NHWHVIMARK CREQFSAYRR RKLAQPPCAP ASASASAAPR GNASPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 1e-76 | MYB family protein |