PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144315.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 229aa    MW: 25645.3 Da    PI: 10.2086
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.71e-13127216198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v+   +l lp + ++++  +  ++  +tl de+g ++   +  rk++    l++GWk+F  a++L +gD vvF+l++   ++++v 
  XP_022144315.1 127 FIKSMVRSHVSGCFWLGLPAHVCKTILPN--RDGVMTLIDEDGDEYPTIYLARKTG----LSGGWKGFSIAHKLGDGDAVVFQLIR--PTTCKVY 213
                     89*********************999433..4458***************656665....***********************998..5556788 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_022144315.1 214 ILR 216
                     877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGVANLSYEE CRRKRLEENK KRMEALNLPL LSQALLDSSP SKSSPSKLGK PRVTQKQLVV  60
VRRSSRVAKQ SAPVYAEVLI NRVVIPRRTS RARDFSNQFY ASDEARKNAF ERAEQLQSGL  120
EPNYPSFIKS MVRSHVSGCF WLGLPAHVCK TILPNRDGVM TLIDEDGDEY PTIYLARKTG  180
LSGGWKGFSI AHKLGDGDAV VFQLIRPTTC KVYILRAHSS REDSDSNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-57B3 family protein