PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144269.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 547aa MW: 62163.8 Da PI: 6.132

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	131	8.9e-41	11	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p Gf F+Pt+eel+++yLk+k+ g++ + i+e+d+y+++Pw+Lp + +++++ ew+fF ++ + + +g +++r+t++gyWk+tg+d+++++ XP_022144269.1 11 PIGFGFRPTEEELITHYLKNKMLGHDSLV-PWIREIDLYNYDPWELPkEsVFESDNYEWFFFRSQPT-NGRGPKTKRTTRTGYWKSTGEDRKIKA 103 89*********************9666.77***********53344445558888877655.6789******************* PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++ +k+Lvf++gr+pkg+kt+W++hey+l XP_022144269.1 104 RgTNKVIANRKILVFHRGRSPKGVKTNWIIHEYHL 138 96677799************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MAFPPNVCQW PIGFGFRPTE EELITHYLKN KMLGHDSLVP WIREIDLYNY DPWELPKESV 60 FESDNYEWFF FRSQPTNGRG PKTKRTTRTG YWKSTGEDRK IKARGTNKVI ANRKILVFHR 120 GRSPKGVKTN WIIHEYHLHP DTNIAYQRQF VICRLKENAE EKDVSTCDQN SSVASHLKDE 180 VTAIREMYTN NPTNEKSVLG PPALTDIQPA NAYNGEVNRQ SVRATASESE VGLTEWLNSL 240 PDECFDDATS KMCRSPGHCE PDPTLMDFQP ANGNDGEVNN QLLQPGASES QVNLTEIFDK 300 VLLEDEKCDE VTSKICIDTY NDEELDNMVL ELQCGGFSSD IVNDAAYGWQ NNHSSPSWFH 360 ECTSSTIKQF RRSPLTVKRF RYKEEKDIYC LDELQGNSRV LSGEGEARMC GISWDNYHSD 420 HGSRICQPKS SNTVSCGVRL KREIKSEGIS QDKAKEVEKH IEVVTSPQLS MTDSNNGLKS 480 EAGHKATKCG VSCCVYTKQA RNVFSYILTT KCIQHNSSLP LVYFAKAFLG VVMFVMFAQE 540 ILLFGQW

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MAFPPNVCQW PIGFGFRPTE EELITHYLKN KMLGHDSLVP WIREIDLYNY DPWELPKESV  60
FESDNYEWFF FRSQPTNGRG PKTKRTTRTG YWKSTGEDRK IKARGTNKVI ANRKILVFHR  120
GRSPKGVKTN WIIHEYHLHP DTNIAYQRQF VICRLKENAE EKDVSTCDQN SSVASHLKDE  180
VTAIREMYTN NPTNEKSVLG PPALTDIQPA NAYNGEVNRQ SVRATASESE VGLTEWLNSL  240
PDECFDDATS KMCRSPGHCE PDPTLMDFQP ANGNDGEVNN QLLQPGASES QVNLTEIFDK  300
VLLEDEKCDE VTSKICIDTY NDEELDNMVL ELQCGGFSSD IVNDAAYGWQ NNHSSPSWFH  360
ECTSSTIKQF RRSPLTVKRF RYKEEKDIYC LDELQGNSRV LSGEGEARMC GISWDNYHSD  420
HGSRICQPKS SNTVSCGVRL KREIKSEGIS QDKAKEVEKH IEVVTSPQLS MTDSNNGLKS  480
EAGHKATKCG VSCCVYTKQA RNVFSYILTT KCIQHNSSLP LVYFAKAFLG VVMFVMFAQE  540
ILLFGQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	4e-36	NAC family protein