PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022144220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family BBR-BPC
Protein Properties Length: 342aa    MW: 38398.6 Da    PI: 9.9409
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022144220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind390.13.3e-11913421301
       GAGA_bind   1 mdddgsre..rnkg..yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllv 87 
                     mdd+g+re  r+k+  +y++a  + + +++   +q+m+++aerda+i+ernlalsekk a+aerdma+lqrd+a+aern+al+erdn++++l+++
  XP_022144220.1   1 MDDSGHREngRHKAehQYKSAqgQWMMQHQpsMKQIMAIMAERDAAIQERNLALSEKKTALAERDMAYLQRDAAIAERNNALLERDNAIATLQYR 95 
                     9*****99999999878885555445444422469************************************************************ PP

       GAGA_bind  88 ensla...salpvgvqvlsgtksidslqqlse......pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksek 173
                     ensl+    ++p+g+q+ +g+k+i++ qq+++      p++++++++ re++ ++a p++  a+e+++++++k++++ak   +++ kk+    +k
  XP_022144220.1  96 ENSLTsnnLSCPPGCQIARGVKHIHHPQQQQQqhthhvPHMNETTYNPREMHPNDACPVSPVASESTKARRNKRTKEAKAVTTPN-KKV----SK 185
                     **99877789****************9985444688999******************9998777777766666444433322222.222....22 PP

       GAGA_bind 174 skkkvkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCttti 239
                       +kvk+e +d +                             sk ++k +dl+ln+v++Dest+P+P+CsCtG+ rqCYkWGnGGWqSaCCttt+
  XP_022144220.1 186 APRKVKREAEDLNkimlgksqewkdeigimsggddlnkqlvvSKLDWKGQDLGLNQVAFDESTMPAPICSCTGVIRQCYKWGNGGWQSACCTTTM 280
                     22333333333222444555678999********************************************************************* PP

       GAGA_bind 240 SvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     S+yPLP+++++r+aR++grKmS++af+klL++LaaeG+dls pvDLk+hWAkHGtn+++ti+
  XP_022144220.1 281 SMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSAPVDLKNHWAKHGTNRYITIK 342
                     *************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MDDSGHRENG RHKAEHQYKS AQGQWMMQHQ PSMKQIMAIM AERDAAIQER NLALSEKKTA  60
LAERDMAYLQ RDAAIAERNN ALLERDNAIA TLQYRENSLT SNNLSCPPGC QIARGVKHIH  120
HPQQQQQQHT HHVPHMNETT YNPREMHPND ACPVSPVASE STKARRNKRT KEAKAVTTPN  180
KKVSKAPRKV KREAEDLNKI MLGKSQEWKD EIGIMSGGDD LNKQLVVSKL DWKGQDLGLN  240
QVAFDESTMP APICSCTGVI RQCYKWGNGG WQSACCTTTM SMYPLPAVPN KRHARVGGRK  300
MSGSAFNKLL SRLAAEGHDL SAPVDLKNHW AKHGTNRYIT IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-160BBR-BPC family protein