PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022144186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | DBB | ||||||||
Protein Properties | Length: 313aa MW: 33432.9 Da PI: 7.3387 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.2 | 1.2e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ ++ fC+ ++ lC+ C H+ H+ XP_022144186.1 4 QCDVCEKGDASVFCTADEAVLCNLCDHRVHHAnklaskHR 43 7******88*******************964446777776 PP | |||||||
2 | zf-B_box | 23.9 | 8.6e-08 | 54 | 95 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e+++C+ + e + lfC++++ lC++C + +H+ H XP_022144186.1 54 EAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSAneltkkH 95 6799*******9*********************655555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MKIQCDVCEK GDASVFCTAD EAVLCNLCDH RVHHANKLAS KHRRFSLLRP SAAEAPVCDV 60 CRERRGFLFC QQDRAILCRE CDDPIHSANE LTKKHDRFLL TGVKLSTTAA LYTPPPSGEK 120 PIGSGGRGVS DPKSKRSVKN PPAVSPAPIT CPPSVRVNAP QNIPPAAAVN KGGGGLIPTG 180 GGGLASSISE YLMETLPGWH FEDFLDSSVP PPFVECGGVG LPFVEGEIDG CFSSSESLEL 240 WVPQGPPPAL YGSGLMTMNN SNTNNGLKET KELGINSSKV VNRSVWTDDG FTVPQITSTA 300 TPSAGFKRSR PFW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75540.1 | 1e-79 | DBB family protein |