PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022144185.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

DBB

Protein Properties

Length: 315aa MW: 33674.2 Da PI: 7.3387

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022144185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.2e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ ++ fC+ ++ lC+ C H+ H+ XP_022144185.1 4 QCDVCEKGDASVFCTADEAVLCNLCDHRVHHAnklaskHR 43 7****88*****************964446777776 PP
2	zf-B_box	23.9	8.6e-08	54	95	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e+++C+ + e + lfC++++ lC++C + +H+ H XP_022144185.1 54 EAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSAneltkkH 95 6799*****9*******************655555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MKIQCDVCEK GDASVFCTAD EAVLCNLCDH RVHHANKLAS KHRRFSLLRP SAAEAPVCDV 60 CRERRGFLFC QQDRAILCRE CDDPIHSANE LTKKHDRFLL TGVKLSTTAA LYTPPPSGEK 120 PIGSGGRGVS DPKSKRSVKN PPAVSPAPIT CPPSVRVNAP QNIPPAAAVN KGGGGLIPTG 180 GGGLASSISE YLMETLPGWH FEDFLDSSVP PPFVELQCGG VGLPFVEGEI DGCFSSSESL 240 ELWVPQGPPP ALYGSGLMTM NNSNTNNGLK ETKELGINSS KVVNRSVWTD DGFTVPQITS 300 TATPSAGFKR SRPFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	3e-79	DBB family protein