PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143880.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 301aa MW: 33227 Da PI: 7.9164

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.4	9.3e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l + ++ +G+g +W + +++ g+ R++k+c++rw++yl XP_022143880.1 14 RGPWSPEEDAKLRQHIHNFGTGgNWISLPSKAGLERCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	39.6	1.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++ Ed ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022143880.1 69 GHFSPHEDRIICSLFTAIGSR-WSIIAAQLP-GRTDNEIKNHWNT 111 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MGRAPCCDKA SVKRGPWSPE EDAKLRQHIH NFGTGGNWIS LPSKAGLERC GKSCRLRWLN 60 YLRPNIKHGH FSPHEDRIIC SLFTAIGSRW SIIAAQLPGR TDNEIKNHWN TKLKKKLMMG 120 LISIPEIKPN PAAVSSITGV SPPPQTAAGV WSFAGPANPS PGCNDSVGLN NNMQRYYYGN 180 QIQENFLSFG GDQASCSSSD GGGGGGGSYG KEMGHFQNGF YGGVEDHHRK QPIGVMGNEG 240 GWSEKEIGVW KEETPLECSF EEIKRLISCS DDNNNYNNNN NVCVSFDENY KSGERINNYY 300 Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-68	MYB family protein