PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022143696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28366.9 Da PI: 5.6356 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.7e-18 | 73 | 123 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 sgy+GVr+++ +g+Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+++l+g XP_022143696.1 73 SGYRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAALALKG 123 89*****888.8*********94....478***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MNMINMNLNL NLNRPYNNAC SSSTTGLHQF SIHKMPPRII QFHTHPSEIK TSSLIFRITM 60 YFSKTKTGPN PTSGYRGVRR RSSGKWVSEI REPRKPNRIW LGTFPTPEMA AVAYDVAALA 120 LKGPDADLNF PNSASSLPVP ASTSARDIQA AATSAAAAIG AAAAAMGIGM RMDGNSLSSN 180 EGSGSGSRME EEEEYGVVGE FGGFVEEDMI FDMPNILMNM AEGMLLTPPS FNFNNNLNPP 240 NDHFDYATTY APQDTLWDFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 1e-20 | ERF family protein |