PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022143611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 29410.2 Da PI: 5.7027 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed++l++ +++ G +W++ +++ g+ R++k+c++rw +yl XP_022143611.1 14 RGPWSPQEDQILINFIQLNGHSNWRALPKKAGLLRCGKSCRLRWTNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_022143611.1 67 RGDFTIEEEQTIINLHQMLGNR-WAAIAAKLP-GRTDNEIKNVWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGRAPCCEKV GLKRGPWSPQ EDQILINFIQ LNGHSNWRAL PKKAGLLRCG KSCRLRWTNY 60 LRPDIKRGDF TIEEEQTIIN LHQMLGNRWA AIAAKLPGRT DNEIKNVWHT HLKKRSLNQN 120 QTLKDHSQLK KKSCLRDRPP YSVIKSDSGE KIDHRTMNNT DNNVSDNDTK LVELAFAEDF 180 LKNLLSEEEF FDIDSNLEKD YNCGMVINDE VEIPLSGEEF NSCGSSETLD IMDFWRSVFM 240 RDGELPEVLE ESNII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-75 | MYB family protein |