PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143587.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family FAR1
Protein Properties Length: 181aa    MW: 20498.2 Da    PI: 10.485
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.11.1e-2643132190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY eYA+++GF vr+ + ++s  +g++  r++ C+k+g++ +++    + +++r++ r gCka++ vk+ek+gkw+vt+++++HnH+l+
  XP_022143587.1  43 KFYVEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHRGIYGSDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLV 132
                     6****************************************99999999***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MNLDDGSGPA HNSIEVNTDA AEGNVTLEPY VGMEFDSEDA ARKFYVEYAR QMGFVVRIMQ  60
RRRSGIDGRT LARRLGCNKQ GFSPNHRGIY GSDKKSRPSA REGCKATILV KMEKSGKWVV  120
TRFVKDHNHP LVACSNGFNN SEGQWSYLSS YPTLKQLTSR AIKIRRSRSL KWSWSIRSNY  180
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.18e-52FAR1 family protein