PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022143387.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 268aa    MW: 29200.4 Da    PI: 4.647
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022143387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036106128123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022143387.1 106 FSCNYCQRKFFSSQALGGHQNAH 128
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MKPFDLDLEK EASSANDCDI TSSQVASSIS LHENSNDNSL ITNNSFLPDP IAAQPGFESV  60
CLDLTLNFNI EDLGTQDSTG FSLSSTSESS NEPASHTTAA AVPRVFSCNY CQRKFFSSQA  120
LGGHQNAHKR ERTLAKRAMR MGILAERYAS LASLPLKGSS FRSLGIKAHS SLLHGFTAPM  180
KPAEIRSTAR FEPGYIGMPI FMEDDDAELL WPGSFRPTAE TGNARELTQP SFVVTGVRSI  240
RSADKTPSED IENENEDEDS ILDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.13e-42C2H2 family protein