PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143033.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 349aa MW: 37486.4 Da PI: 9.9563

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	278	335	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYe++Hnh XP_022143033.1 278 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYENDHNHA 335 99**********************998**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAVDLMVGFG DAAAATSPNM EENAAVSAVQ EAASAGIQSV ENFLRLMSNS STSPPDPLAA 60 YQAVADSVVN KFKKVISLLD RNRTGHARFR RAPLSTSPPP PPKLQDPGSS VPQIPAKKHE 120 SVSAFKVYCP TPSPVVRLPP LPHNPPNTFQ THPNTSSLLL KNGSMDRKDS TTTINFAASP 180 PVSAANSYIS SLTGDTESLQ PSLSSGFQFT HMSQVSSAGK PPLSSSSLKR KCNSMDDSAV 240 KCGSSSGRCH CSKKRKNRIK REIRVPAVSA KLADIPPDDY SWRKYGQKPI KGSPHPRGYY 300 KCSSLRGCPA RKHVERALDD PTMLIVTYEN DHNHAHSTES PAALVLESS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAVDLMVGFG DAAAATSPNM EENAAVSAVQ EAASAGIQSV ENFLRLMSNS STSPPDPLAA  60
YQAVADSVVN KFKKVISLLD RNRTGHARFR RAPLSTSPPP PPKLQDPGSS VPQIPAKKHE  120
SVSAFKVYCP TPSPVVRLPP LPHNPPNTFQ THPNTSSLLL KNGSMDRKDS TTTINFAASP  180
PVSAANSYIS SLTGDTESLQ PSLSSGFQFT HMSQVSSAGK PPLSSSSLKR KCNSMDDSAV  240
KCGSSSGRCH CSKKRKNRIK REIRVPAVSA KLADIPPDDY SWRKYGQKPI KGSPHPRGYY  300
KCSSLRGCPA RKHVERALDD PTMLIVTYEN DHNHAHSTES PAALVLESS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	255	262	RKNRIKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	2e-85	WRKY family protein