PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022143026.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 350aa MW: 37573.4 Da PI: 9.9563

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022143026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.1e-30	279	336	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYe++Hnh XP_022143026.1 279 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYENDHNHA 336 99**********************998**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MAVDLMVGFG DAAAATSPNM EENAAVSAVQ EAASAGIQSV ENFLRLMSNS STSPPDPLAA 60 YQAVADSVVN KFKKVISLLD RNRTGHARFR RAPLSTSPPP PPKLQDPGSS VPQIPAKKHE 120 SVSAFKVYCP TPSPVVRLPP LPHNPPNTFQ THPNTSSLLL KNGSMDRKDS TTTINFAASP 180 PVSAANSYIS SLTGDTESLQ PSLSSGFQFT HMSQVSSAGK PPLSSSSLKR KCNSMDDSAV 240 KCGSSSGRCH CSKKSRKNRI KREIRVPAVS AKLADIPPDD YSWRKYGQKP IKGSPHPRGY 300 YKCSSLRGCP ARKHVERALD DPTMLIVTYE NDHNHAHSTE SPAALVLESS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MAVDLMVGFG DAAAATSPNM EENAAVSAVQ EAASAGIQSV ENFLRLMSNS STSPPDPLAA  60
YQAVADSVVN KFKKVISLLD RNRTGHARFR RAPLSTSPPP PPKLQDPGSS VPQIPAKKHE  120
SVSAFKVYCP TPSPVVRLPP LPHNPPNTFQ THPNTSSLLL KNGSMDRKDS TTTINFAASP  180
PVSAANSYIS SLTGDTESLQ PSLSSGFQFT HMSQVSSAGK PPLSSSSLKR KCNSMDDSAV  240
KCGSSSGRCH CSKKSRKNRI KREIRVPAVS AKLADIPPDD YSWRKYGQKP IKGSPHPRGY  300
YKCSSLRGCP ARKHVERALD DPTMLIVTYE NDHNHAHSTE SPAALVLESS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	263	RKNRIKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	2e-92	WRKY family protein