PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142901.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

DBB

Protein Properties

Length: 297aa MW: 32354.2 Da PI: 5.1898

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.9	1.5e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl XP_022142901.1 4 QCNVCEVAEATVLCCADEAALCWACDEKIHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	29.1	2.1e-09	52	90	1	39
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkgHtv 39 s+++kC+ ++e +fC +++ llC++C +++H t+ XP_022142901.1 52 SQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTY 90 689*******************************66333 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKIQCNVCEV AEATVLCCAD EAALCWACDE KIHAANKLAS KHQRVPLSGS SSQMPKCDIC 60 QEASGYIFCL EDRALLCRKC DVAIHTANTY VSAHQRFLLT GVKVALEPTD PVACSSTPKA 120 ESREKSTETK VVSRSLPQRE FSIPSPGELS RSLSIPIGSE DFVPNKIFLS GDSISGGFSQ 180 WHMDEFINLT GFNQSYGYMD NGSSKADSGK LGDSDSPVLR AAEVELDDDD ECSGQVPEAS 240 WTVPQIPSPP TASGLYWPRS YHNSMDGAVF VPDISGSSER VQHCSHNGTF SKRRRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-98	DBB family protein