PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142411.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 288aa MW: 32829.7 Da PI: 7.9716

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.3	7.3e-27	165	249	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev+ Li +r+++e+++r++ k+ Wee+s m + gf+rs+k+Ckekwen+nk++k++ + k + + +tcpyf++l+ XP_022142411.1 165 RWPQAEVQSLISLRTSLEHKFRATGXKGSIWEEISVEMNKIGFNRSAKKCKEKWENMNKYFKRTVGTGKAN-FANGKTCPYFQELD 249 8*************************************************************9999987.556679****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MKNGGSGAVI AAENLSRSRE GPQLDEDSCS TSDGGDDIVS TKKTLNHKRK RTTRSLEVFV 60 ENLVMKVMDK QEQMHKQLID MIEKKEKERT VREEAWKQRE IERIRRDEEL RAQETTRSLA 120 VISLIQNLLG HEIQISAPVE NQCTEDDGGE SSIQKELKGD SSSRRWPQAE VQSLISLRTS 180 LEHKFRATGX KGSIWEEISV EMNKIGFNRS AKKCKEKWEN MNKYFKRTVG TGKANFANGK 240 TCPYFQELDV LYRNGVVNTA AVFDNTNSEN KPKAEKSIDL LHENEAFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	87	KRKRTTRSLEVFVENLVMKVMDKQEQMHKQLIDMIEKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	2e-48	Trihelix family protein