PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022142259.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 446aa    MW: 48182.7 Da    PI: 7.3756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022142259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.3e-053323701255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022142259.1 332 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 370
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MESAANLHHH QHQLQDQLLL PSSSSSSSSS LPVIPSYFGL GTSHGWTPNI SLNTCNYNPR  60
IFNNGATSIP IRDCGQKNNT SPPLNSSMVQ DLGLFQWSSG VNSSGSSFLF HDPQGGKIKE  120
EISSLASAAE SFPKFTEMLN NNNSPSCTNQ DFDHLKNTNS NDSPAEDLND LSHKLLIKTL  180
ISSGCQIDGG DHIKPGGHLL YSTTTSRPNR GHFAQIYPSI NVSNWNLSSP APPFSNSLDL  240
NLQTPADMLA ASAGKFSHSQ DNFGIFRETL PDYHDHIPSV PCIPSKMTPF SSEVTEAKRP  300
CNSMEPRVNQ QPPPSKKTRL DSRASCPPFK VRKEKLGDRI AALQQLVAPF GKTDTASVLM  360
EAIGYIKFLQ NQVETLSVPY MKPSCNKASK PTHRSSVEDG SEGQPNRDLR SRGLCLVPFG  420
CLSYVTGDGG GGGGIWPPPG FNGGTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.14e-61bHLH family protein