PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142119.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Protein Properties

Length: 900aa MW: 99073.4 Da PI: 7.0593

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.4e-18	350	449	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ +++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_022142119.1 350 FEKMLSASDAGRIGRLVLPKKCAEAYfpSISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-PEGK 442 89************************666677788***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022142119.1 443 LVMGFRK 449 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 900 aa Download sequence
MSSAVTAAPS SSALSSKVCY NSECKELKPE RPRKGWRLRT GDFAELCDRC ACAYEEGRFC 60 ETFHLNATGW RCCESCGKRV HCGCIVSAHA FTLLDPGGIE CMTCARKNVI LPLNPAWPPS 120 LFFHSTLPDR LKDLSVKNWS QLAGSGPVPW RQAPSMFNSS LPSGELHHRA PYEVDISAAL 180 NKLNTSERLP IPLEKRKNDD FSERFLNGSL KQCAQDICEN GTAGGIKCED KASSCSNIPQ 240 QSSFVKEDSS TTQYGLSVPY APPNESNVRG RISGTHLRPA PSSPLPKQIH TNLQNGADTS 300 NETHIRNGRP RGDSRGTGKN YLLPRYWPRF TDQELQQISV DSNSVITPLF EKMLSASDAG 360 RIGRLVLPKK CAEAYFPSIS QPEGLPLKVQ DAKGKEWIFQ FRFWPNNNSR MYVLEGVTPC 420 IQSMQLQAGD IVTFSRLEPE GKLVMGFRKA STAADQENET SKTKNGAPMH GDAELADPNS 480 WTKVDKSGYI AKEALGAKPS ISRKRKNSTL GSKSKRLRIE NEDMIELKIT WEEAQGLLRP 540 PPNQVPSIVV IEGFEFEEYE DAPILGKPTI IPPDGTGERI QWTQCEDCLK WRKLPVSALL 600 PSKWTCSDNS WDPERSICSA AQELSTEQLE ELLSPSNSAA AVKKMKASKL EPDNVVALEG 660 LDTLANLAIL GEGEAIQSPG QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK QTCTCNVCLT 720 VKRRFRTLML RREKKQSEKE AETTRQRYQF QDELFLDRSM DDESLTCSNT STSKLIEEGK 780 INEGSDDDPN RNKPSSSPFK GQIDLNMQPE REEELSPGSD SGSMMKLLPD TGDRFLEQQR 840 SNSGGSGSSS SDPLEPGGER EHRGGNNSSN GIDLSSNVDV DKDCPATLSF KASASMSATG

Sequence ? help Back to Top

Protein Sequence Length: 900 aa Download sequence

MSSAVTAAPS SSALSSKVCY NSECKELKPE RPRKGWRLRT GDFAELCDRC ACAYEEGRFC  60
ETFHLNATGW RCCESCGKRV HCGCIVSAHA FTLLDPGGIE CMTCARKNVI LPLNPAWPPS  120
LFFHSTLPDR LKDLSVKNWS QLAGSGPVPW RQAPSMFNSS LPSGELHHRA PYEVDISAAL  180
NKLNTSERLP IPLEKRKNDD FSERFLNGSL KQCAQDICEN GTAGGIKCED KASSCSNIPQ  240
QSSFVKEDSS TTQYGLSVPY APPNESNVRG RISGTHLRPA PSSPLPKQIH TNLQNGADTS  300
NETHIRNGRP RGDSRGTGKN YLLPRYWPRF TDQELQQISV DSNSVITPLF EKMLSASDAG  360
RIGRLVLPKK CAEAYFPSIS QPEGLPLKVQ DAKGKEWIFQ FRFWPNNNSR MYVLEGVTPC  420
IQSMQLQAGD IVTFSRLEPE GKLVMGFRKA STAADQENET SKTKNGAPMH GDAELADPNS  480
WTKVDKSGYI AKEALGAKPS ISRKRKNSTL GSKSKRLRIE NEDMIELKIT WEEAQGLLRP  540
PPNQVPSIVV IEGFEFEEYE DAPILGKPTI IPPDGTGERI QWTQCEDCLK WRKLPVSALL  600
PSKWTCSDNS WDPERSICSA AQELSTEQLE ELLSPSNSAA AVKKMKASKL EPDNVVALEG  660
LDTLANLAIL GEGEAIQSPG QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK QTCTCNVCLT  720
VKRRFRTLML RREKKQSEKE AETTRQRYQF QDELFLDRSM DDESLTCSNT STSKLIEEGK  780
INEGSDDDPN RNKPSSSPFK GQIDLNMQPE REEELSPGSD SGSMMKLLPD TGDRFLEQQR  840
SNSGGSGSSS SDPLEPGGER EHRGGNNSSN GIDLSSNVDV DKDCPATLSF KASASMSATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-150	B3 family protein