PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022142052.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 638aa MW: 68531.7 Da PI: 6.8606

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022142052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.4	9.4e-31	357	415	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_022142052.1 357 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 415 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MDKGWGLTLR DSESIGFFSN KPPTSGDLNY RHPTIRMFQG IEFPGKLGRT DHDDAAAPTP 60 PDDNNRLAVN EVDFFSDNKR VLDDREDHQD SKPTNIVTTT TGVNKLEDKI LAPPRPAFNI 120 VNTGLHLLTA NTGSDQSTVD DGISSDGEDK RAKNELAQLQ VELQRMNAEN HKLRDMLSHV 180 SNNYSTLQMH LFTLMQQQPN QASEPPAHAH EREIGEKKPG EKQDQVGRVQ VVPRQFMDLG 240 PSGTAETDEL SNSSSDERTR SGSPLNNAAE TASKKSSGRD QEMPPSFDHQ DNNSNFRSDN 300 KRSIGGREES PESESHAWGP NKAPRLNSSK PLDQSTEATM RKARVSVRAR SEAPMISDGC 360 QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA 420 MAMASTTTAA ASMLLSGSMS SADHSLMNPN LLARAILPCS SSMATISASA PFPTITLDLT 480 HTPNALQFQR PAAAPFHVPF PAGQPPSAAA AQLPQVLGQA LYNQSKFSGL QLSHEMGVGG 540 GGPNNSHLGH PQIAQPAQPG AASFADTLSA ATAAITADPN FTAALAAAIS SIIGGAHSNN 600 NNNNNNTPTT TTTTNNNNNG STNMTSSNSS KISSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MDKGWGLTLR DSESIGFFSN KPPTSGDLNY RHPTIRMFQG IEFPGKLGRT DHDDAAAPTP  60
PDDNNRLAVN EVDFFSDNKR VLDDREDHQD SKPTNIVTTT TGVNKLEDKI LAPPRPAFNI  120
VNTGLHLLTA NTGSDQSTVD DGISSDGEDK RAKNELAQLQ VELQRMNAEN HKLRDMLSHV  180
SNNYSTLQMH LFTLMQQQPN QASEPPAHAH EREIGEKKPG EKQDQVGRVQ VVPRQFMDLG  240
PSGTAETDEL SNSSSDERTR SGSPLNNAAE TASKKSSGRD QEMPPSFDHQ DNNSNFRSDN  300
KRSIGGREES PESESHAWGP NKAPRLNSSK PLDQSTEATM RKARVSVRAR SEAPMISDGC  360
QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA  420
MAMASTTTAA ASMLLSGSMS SADHSLMNPN LLARAILPCS SSMATISASA PFPTITLDLT  480
HTPNALQFQR PAAAPFHVPF PAGQPPSAAA AQLPQVLGQA LYNQSKFSGL QLSHEMGVGG  540
GGPNNSHLGH PQIAQPAQPG AASFADTLSA ATAAITADPN FTAALAAAIS SIIGGAHSNN  600
NNNNNNTPTT TTTTNNNNNG STNMTSSNSS KISSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-128	WRKY family protein