PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022141962.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 24877.3 Da PI: 5.7781 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 70.2 | 1.9e-22 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqv fskRr+g++KKA+EL +LCdae+ + +fs +gkl++y+s XP_022141962.1 9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLFVFSASGKLFDYAS 59 689**********************************************86 PP | |||||||
2 | K-box | 34.2 | 1.1e-12 | 88 | 169 | 15 | 96 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + ++ akL++e+e+ +e+R+++Ge+L+ L ++eL++Le+ L+ +l+++ + + ++ i++ +k ++l een++L++ XP_022141962.1 88 QLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKVDMLVEENQRLNQ 169 55566679***********************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLFVFSA SGKLFDYASS 60 SMQGLLERHN SVHSENLPNL NEPSVELQLE SNMRAKLNEE VEKKTHELRQ MKGEELQGLG 120 MEELKKLEKS LQGGLNRVSE MMDGRNIDLI HDIERKVDML VEENQRLNQL EVEKMTDQMQ 180 NMQGNSSESI VNNCSSSNPS QDYDSSDTSL KLGLPSLEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 8e-43 | MIKC_MADS family protein |