PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022141961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25005.4 Da PI: 5.7781 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 70.2 | 1.9e-22 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqv fskRr+g++KKA+EL +LCdae+ + +fs +gkl++y+s XP_022141961.1 9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLFVFSASGKLFDYAS 59 689**********************************************86 PP | |||||||
2 | K-box | 33.9 | 1.4e-12 | 88 | 169 | 15 | 96 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + ++ akL++e+e+ +e+R+++Ge+L+ L ++eL++Le+ L+ +l+++ + + ++ i++ +k ++l een++L++ XP_022141961.1 88 QLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKVDMLVEENQRLNQ 169 55566679***********************************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 220 aa Download sequence |
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLFVFSA SGKLFDYASS 60 SMQGLLERHN SVHSENLPNL NEPSVELQLE SNMRAKLNEE VEKKTHELRQ MKGEELQGLG 120 MEELKKLEKS LQGGLNRVSE MMDGRNIDLI HDIERKVDML VEENQRLNQL QEVEKMTDQM 180 QNMQGNSSES IVNNCSSSNP SQDYDSSDTS LKLGLPSLEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22540.1 | 9e-43 | MIKC_MADS family protein |