PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141961.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25005.4 Da    PI: 5.7781
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.21.9e-22959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqv fskRr+g++KKA+EL +LCdae+ + +fs +gkl++y+s
  XP_022141961.1  9 KKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLFVFSASGKLFDYAS 59
                    689**********************************************86 PP

2K-box33.91.4e-12881691596
           K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     +  ++  akL++e+e+  +e+R+++Ge+L+ L ++eL++Le+ L+ +l+++ +  +   ++ i++  +k ++l een++L++
  XP_022141961.1  88 QLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMMDGRNIDLIHDIERKVDMLVEENQRLNQ 169
                     55566679***********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTRKKIQIKK IDNIAARQVA FSKRRKGLFK KAKELAILCD AEIGLFVFSA SGKLFDYASS  60
SMQGLLERHN SVHSENLPNL NEPSVELQLE SNMRAKLNEE VEKKTHELRQ MKGEELQGLG  120
MEELKKLEKS LQGGLNRVSE MMDGRNIDLI HDIERKVDML VEENQRLNQL QEVEKMTDQM  180
QNMQGNSSES IVNNCSSSNP SQDYDSSDTS LKLGLPSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.19e-43MIKC_MADS family protein