PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141955.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 1082aa MW: 120647 Da PI: 6.0428

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.5	9.5e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_022141955.1 20 IEAKHRWLRPAEICEILRNYPKFHIASEPPERPPSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022141955.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1082 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFHIASEPPE RPPSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT SIGAVVETDE VSSSSQKSSP RSSSYSSSLN QATSENADSP 180 SPTSTLTSFC EDADTDTYQA TSRLHSFPTS PKMGNGLLLH KKDAALSNLY FPHSPSGNVE 240 GWSSVPDMEF VSQVQKDGLG GTDSGTCVIG SQQTLSSASW EEIFQQCSTG FQTVPSHVLA 300 SSIDPLSSGI ALGQENSIPG KALASNSVIK EDFGSSLTMS SNWQVPFEDS TLSFSKGHVN 360 QFPDLYSVYD IDSRSTEQKS QNATFGSSHE MFCAHPGINN EELLSNDVPL QFKGESYSAM 420 RLSSENDRSN EGTISYSLTL KQSLIDGEES LKKVDSFSRW ITRELVEVDD LHMHPSSGLS 480 WSTVECGDIV DDSSLSPSLS EDQLFSITDF SPKWTFADLE TEVVIIGKFL GNNHSTKCYW 540 SCMFGEVEVP AEVLADGILC CHAPPHSVGQ VPFYVTCSNR LACSEVREFD YLAGSAKDVD 600 VTDVYAAATE ELFMHLRFER LLSLRSSDPP NNLSEGTLEK RNLIRKLILL KEEEDCYGEE 660 LNSQNDRVQH QSKDSLFGKL MREKLYSWLI RKVIEDSKGP NILDDKGQGV LHLAAALGYD 720 WAIRPVVAAG VSINFRDVNG WTAVHWAAFC GREQTVAILI SLGAAPGLLT DPSPEYPLCR 780 TPADLASTNG HKGIAGFLAE LSLTSHLSSL TMADTKEDGV LAGSTRMATP LSDGFMPGDL 840 SLKDSLTAVC NATQAAGRIH QMFRLQSFQR KKLSESGPDE FGYSDDSAIS LVTARARKSG 900 LSNSPAHAAA VHIQKKFRGW RMRKEFLLIR QRIVKIQAHV RGHQVRKQYR KIVWSVGLLD 960 KIILRWRRKG SGLRGFRPDT VAKDPPPQME PPKEDDYDFL KEGRRQTEER LQKALTRVKS 1020 MAQYPEGRDQ YRRLLTVVQK CRETKVSNMA ITSSSEEIIE GDDMIDLDTL LDDDTLMSMT 1080 FD

Sequence ? help Back to Top

Protein Sequence Length: 1082 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFHIASEPPE RPPSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT SIGAVVETDE VSSSSQKSSP RSSSYSSSLN QATSENADSP  180
SPTSTLTSFC EDADTDTYQA TSRLHSFPTS PKMGNGLLLH KKDAALSNLY FPHSPSGNVE  240
GWSSVPDMEF VSQVQKDGLG GTDSGTCVIG SQQTLSSASW EEIFQQCSTG FQTVPSHVLA  300
SSIDPLSSGI ALGQENSIPG KALASNSVIK EDFGSSLTMS SNWQVPFEDS TLSFSKGHVN  360
QFPDLYSVYD IDSRSTEQKS QNATFGSSHE MFCAHPGINN EELLSNDVPL QFKGESYSAM  420
RLSSENDRSN EGTISYSLTL KQSLIDGEES LKKVDSFSRW ITRELVEVDD LHMHPSSGLS  480
WSTVECGDIV DDSSLSPSLS EDQLFSITDF SPKWTFADLE TEVVIIGKFL GNNHSTKCYW  540
SCMFGEVEVP AEVLADGILC CHAPPHSVGQ VPFYVTCSNR LACSEVREFD YLAGSAKDVD  600
VTDVYAAATE ELFMHLRFER LLSLRSSDPP NNLSEGTLEK RNLIRKLILL KEEEDCYGEE  660
LNSQNDRVQH QSKDSLFGKL MREKLYSWLI RKVIEDSKGP NILDDKGQGV LHLAAALGYD  720
WAIRPVVAAG VSINFRDVNG WTAVHWAAFC GREQTVAILI SLGAAPGLLT DPSPEYPLCR  780
TPADLASTNG HKGIAGFLAE LSLTSHLSSL TMADTKEDGV LAGSTRMATP LSDGFMPGDL  840
SLKDSLTAVC NATQAAGRIH QMFRLQSFQR KKLSESGPDE FGYSDDSAIS LVTARARKSG  900
LSNSPAHAAA VHIQKKFRGW RMRKEFLLIR QRIVKIQAHV RGHQVRKQYR KIVWSVGLLD  960
KIILRWRRKG SGLRGFRPDT VAKDPPPQME PPKEDDYDFL KEGRRQTEER LQKALTRVKS  1020
MAQYPEGRDQ YRRLLTVVQK CRETKVSNMA ITSSSEEIIE GDDMIDLDTL LDDDTLMSMT  1080
FD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein