PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141954.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 1083aa MW: 120776 Da PI: 5.9851

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.5	9.6e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_022141954.1 20 IEAKHRWLRPAEICEILRNYPKFHIASEPPERPPSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022141954.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1083 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFHIASEPPE RPPSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT SIGAVVETDE VSSSSQKSSP RSSSYSSSLN QATSENADSP 180 SPTSTLTSFC EDADTEDTYQ ATSRLHSFPT SPKMGNGLLL HKKDAALSNL YFPHSPSGNV 240 EGWSSVPDME FVSQVQKDGL GGTDSGTCVI GSQQTLSSAS WEEIFQQCST GFQTVPSHVL 300 ASSIDPLSSG IALGQENSIP GKALASNSVI KEDFGSSLTM SSNWQVPFED STLSFSKGHV 360 NQFPDLYSVY DIDSRSTEQK SQNATFGSSH EMFCAHPGIN NEELLSNDVP LQFKGESYSA 420 MRLSSENDRS NEGTISYSLT LKQSLIDGEE SLKKVDSFSR WITRELVEVD DLHMHPSSGL 480 SWSTVECGDI VDDSSLSPSL SEDQLFSITD FSPKWTFADL ETEVVIIGKF LGNNHSTKCY 540 WSCMFGEVEV PAEVLADGIL CCHAPPHSVG QVPFYVTCSN RLACSEVREF DYLAGSAKDV 600 DVTDVYAAAT EELFMHLRFE RLLSLRSSDP PNNLSEGTLE KRNLIRKLIL LKEEEDCYGE 660 ELNSQNDRVQ HQSKDSLFGK LMREKLYSWL IRKVIEDSKG PNILDDKGQG VLHLAAALGY 720 DWAIRPVVAA GVSINFRDVN GWTAVHWAAF CGREQTVAIL ISLGAAPGLL TDPSPEYPLC 780 RTPADLASTN GHKGIAGFLA ELSLTSHLSS LTMADTKEDG VLAGSTRMAT PLSDGFMPGD 840 LSLKDSLTAV CNATQAAGRI HQMFRLQSFQ RKKLSESGPD EFGYSDDSAI SLVTARARKS 900 GLSNSPAHAA AVHIQKKFRG WRMRKEFLLI RQRIVKIQAH VRGHQVRKQY RKIVWSVGLL 960 DKIILRWRRK GSGLRGFRPD TVAKDPPPQM EPPKEDDYDF LKEGRRQTEE RLQKALTRVK 1020 SMAQYPEGRD QYRRLLTVVQ KCRETKVSNM AITSSSEEII EGDDMIDLDT LLDDDTLMSM 1080 TFD

Sequence ? help Back to Top

Protein Sequence Length: 1083 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFHIASEPPE RPPSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT SIGAVVETDE VSSSSQKSSP RSSSYSSSLN QATSENADSP  180
SPTSTLTSFC EDADTEDTYQ ATSRLHSFPT SPKMGNGLLL HKKDAALSNL YFPHSPSGNV  240
EGWSSVPDME FVSQVQKDGL GGTDSGTCVI GSQQTLSSAS WEEIFQQCST GFQTVPSHVL  300
ASSIDPLSSG IALGQENSIP GKALASNSVI KEDFGSSLTM SSNWQVPFED STLSFSKGHV  360
NQFPDLYSVY DIDSRSTEQK SQNATFGSSH EMFCAHPGIN NEELLSNDVP LQFKGESYSA  420
MRLSSENDRS NEGTISYSLT LKQSLIDGEE SLKKVDSFSR WITRELVEVD DLHMHPSSGL  480
SWSTVECGDI VDDSSLSPSL SEDQLFSITD FSPKWTFADL ETEVVIIGKF LGNNHSTKCY  540
WSCMFGEVEV PAEVLADGIL CCHAPPHSVG QVPFYVTCSN RLACSEVREF DYLAGSAKDV  600
DVTDVYAAAT EELFMHLRFE RLLSLRSSDP PNNLSEGTLE KRNLIRKLIL LKEEEDCYGE  660
ELNSQNDRVQ HQSKDSLFGK LMREKLYSWL IRKVIEDSKG PNILDDKGQG VLHLAAALGY  720
DWAIRPVVAA GVSINFRDVN GWTAVHWAAF CGREQTVAIL ISLGAAPGLL TDPSPEYPLC  780
RTPADLASTN GHKGIAGFLA ELSLTSHLSS LTMADTKEDG VLAGSTRMAT PLSDGFMPGD  840
LSLKDSLTAV CNATQAAGRI HQMFRLQSFQ RKKLSESGPD EFGYSDDSAI SLVTARARKS  900
GLSNSPAHAA AVHIQKKFRG WRMRKEFLLI RQRIVKIQAH VRGHQVRKQY RKIVWSVGLL  960
DKIILRWRRK GSGLRGFRPD TVAKDPPPQM EPPKEDDYDF LKEGRRQTEE RLQKALTRVK  1020
SMAQYPEGRD QYRRLLTVVQ KCRETKVSNM AITSSSEEII EGDDMIDLDT LLDDDTLMSM  1080
TFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein