PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141772.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 554aa MW: 60756 Da PI: 6.9098

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.8	1.5e-16	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRR+riN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022141772.1 357 VHNLSERRRRERINEKMKALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 403 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MSYCFPDWNF EGDLPTANHK KSMGPEHDDL VELLWRNGQV VLNSQKGRKP SLVPSDVRQF 60 QKQNQLLYRS NVSCGNSSNL IQDDETVSWI QDPIEDSFEK EFCSNFFSEL PHADPIEIVK 120 QPIKHFQDEK HTRFGAFDNT THVSFGNSQR PSSKHPAAAL AEFPTNTMPP PRFQLPNSTQ 180 QTKDFGDLGK IVNFSQVPVP LKGDLGSSNG GRESGNLIQG EGRDCSAMTV GSSHCGSNQV 240 PNSNDPDASR VSTSGFGNAG LSAGLSKEDH RKMVPQGERG KTETMDPTST SSSGGSGSSM 300 DRSRTIGQSN GGNRNKRKGR DGEESECQSE TAELESAEGN KAAPRSGSSR RTRAAEVHNL 360 SERRRRERIN EKMKALQELI PHCNKTDKAS MLDEAIEYLK SLQLQLQVMW MGSGMAPMMF 420 PGIQHYMSRM AMGMGMGMAQ PSMPSIHNSM QLPRVPMVDQ SVSVAPTPNQ PMMCQPPIFN 480 PINYQNQMQN PAFQEQYARL MGLHHMQPAS QPINVFRFCP PAVLQSQTVA APGPVSGPNA 540 GGSVTNDIVD CNLG

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MSYCFPDWNF EGDLPTANHK KSMGPEHDDL VELLWRNGQV VLNSQKGRKP SLVPSDVRQF  60
QKQNQLLYRS NVSCGNSSNL IQDDETVSWI QDPIEDSFEK EFCSNFFSEL PHADPIEIVK  120
QPIKHFQDEK HTRFGAFDNT THVSFGNSQR PSSKHPAAAL AEFPTNTMPP PRFQLPNSTQ  180
QTKDFGDLGK IVNFSQVPVP LKGDLGSSNG GRESGNLIQG EGRDCSAMTV GSSHCGSNQV  240
PNSNDPDASR VSTSGFGNAG LSAGLSKEDH RKMVPQGERG KTETMDPTST SSSGGSGSSM  300
DRSRTIGQSN GGNRNKRKGR DGEESECQSE TAELESAEGN KAAPRSGSSR RTRAAEVHNL  360
SERRRRERIN EKMKALQELI PHCNKTDKAS MLDEAIEYLK SLQLQLQVMW MGSGMAPMMF  420
PGIQHYMSRM AMGMGMGMAQ PSMPSIHNSM QLPRVPMVDQ SVSVAPTPNQ PMMCQPPIFN  480
PINYQNQMQN PAFQEQYARL MGLHHMQPAS QPINVFRFCP PAVLQSQTVA APGPVSGPNA  540
GGSVTNDIVD CNLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	367	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59060.1	6e-49	bHLH family protein