PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022141622.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 750aa MW: 83924.1 Da PI: 4.414

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022141622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	587	629	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++++ el++ av+q+G++ + I + ++ gRt+ q+k+++ XP_022141622.1 587 RTKWSKQDTELFYGAVRQFGTD-FCMIQQLFP-GRTRRQIKLKFK 629 789*****************.*****.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG 60 DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS 120 ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD 180 GKIAGENIDM FYGLECLDDF HNQPKNEADP AGLQQATFSS EDGDLEKQRF QECGADIAKD 240 GLNSEATTPS GHCKYRPKPR MRTTKEDTYT QISQPEISNM LPPSPQVTSC DNRCINEASI 300 ATHSDGILND SSINFDGYTS VNQDTEAPVN VESLEYDSYG DILVEDFNSD DQDEMSRGVS 360 GKSGNEKPSV EPNISQQQES FPQVVEENEH KKTSRKLRKQ VSHHLDDPED GVDENQNFPN 420 EPSNGDGCNK NETSISRGKK ASKKSSKTSS ENEKPTRKRK EANKAVPDVQ AEKRPKKFSH 480 STRRNRRQVN KVLLETPEDE IDFQKISFRD LIIYHEYKEK LEKKEASTRR PATNQRTDTV 540 REEFYNDEEE SIASEQGRGS DDDETPDVVD MTSAYFNYQS FMDKTPRTKW SKQDTELFYG 600 AVRQFGTDFC MIQQLFPGRT RRQIKLKFKS EERHHPLRLS DAITNRANDH SHFLSVIGQL 660 KEAANKAKQE ANQDELTENT GDEELPELSP ETNEEEVAKP GEGEGEGEGE GEAQNTEKEE 720 RVGEIHSPLK SDAASDDDDP HRWDEYKFDF

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MDPFDEILSD PGVTARTGGR FQPKIKPRPK KQTVAPQLST LSQDKKETIS DSISCHDGSG  60
DTKSIKSSSQ LPVIEENKES EDDLLLATTI SDFNDCSRPI SVESAERVDS MQFDLDSCVS  120
ILPSDSTTDG PAGSENLTDD TKNLGVLNCS HPSVSTADEA AVLDQSGLEL TQTEDGHFSD  180
GKIAGENIDM FYGLECLDDF HNQPKNEADP AGLQQATFSS EDGDLEKQRF QECGADIAKD  240
GLNSEATTPS GHCKYRPKPR MRTTKEDTYT QISQPEISNM LPPSPQVTSC DNRCINEASI  300
ATHSDGILND SSINFDGYTS VNQDTEAPVN VESLEYDSYG DILVEDFNSD DQDEMSRGVS  360
GKSGNEKPSV EPNISQQQES FPQVVEENEH KKTSRKLRKQ VSHHLDDPED GVDENQNFPN  420
EPSNGDGCNK NETSISRGKK ASKKSSKTSS ENEKPTRKRK EANKAVPDVQ AEKRPKKFSH  480
STRRNRRQVN KVLLETPEDE IDFQKISFRD LIIYHEYKEK LEKKEASTRR PATNQRTDTV  540
REEFYNDEEE SIASEQGRGS DDDETPDVVD MTSAYFNYQS FMDKTPRTKW SKQDTELFYG  600
AVRQFGTDFC MIQQLFPGRT RRQIKLKFKS EERHHPLRLS DAITNRANDH SHFLSVIGQL  660
KEAANKAKQE ANQDELTENT GDEELPELSP ETNEEEVAKP GEGEGEGEGE GEAQNTEKEE  720
RVGEIHSPLK SDAASDDDDP HRWDEYKFDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	5e-36	MYB_related family protein