PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141257.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 784aa    MW: 86575.4 Da    PI: 6.2678
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.54.1e-2282137156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++k +++t++q++eLe++F+++++p+ ++r eL+++lgL+++qVk+WFqNrR+++k
  XP_022141257.1  82 KKKYHRHTPHQIQELENFFKECPHPDDKQRSELSRRLGLETKQVKFWFQNRRTQMK 137
                     79999************************************************999 PP
2START180.11.2e-562925152205
                     HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     la++a++elvk+a+ + p+W ks+     e +n de+ ++f++s        ++ea r+ ++++ ++  lve+l+d + +W e+++    +a+t+
  XP_022141257.1 292 LALAAMNELVKMAQMDGPLWIKSRdgggrETLNLDEYSRTFPSSARmkhrnWTTEATRDNTMLIINSLALVETLMDAN-RWAEMFPcliaRATTV 385
                     6899*************************************88777999999**************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      galq++ ael +lsplvp R   f+R+++q+ +g w++vdvS+d   + + s+s+  +++lpSg+++++++ng skvtwveh+
  XP_022141257.1 386 DVISSGmggtrnGALQVIHAELRVLSPLVPvRTLKFLRFCKQHADGLWAVVDVSIDFSGEGSDSHSFFSCRRLPSGCVVQDMPNGFSKVTWVEHT 480
                     *************************************************************99******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqce 205
                     ++++ + h+l+r+l++sg+ +ga++w+atlqrqc 
  XP_022141257.1 481 EYDETVMHQLYRRLISSGIGFGAQRWLATLQRQCD 515
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 784 aa     Download sequence    
MPSGAIADPS FLAYPISSSE LSTSIRKMDG YGEVCLLGDS FDPSGVVRLR EDEYDSRSGS  60
DNIDGAVSGD DQDANDEQPP RKKKYHRHTP HQIQELENFF KECPHPDDKQ RSELSRRLGL  120
ETKQVKFWFQ NRRTQMKTQI ERHENAILKQ ENDKLRAENS VMKDAIQNPT CNTCGGPSMP  180
VHLSFEEHQL RIENARLRDE LHRLYSVTNK FLGWPVLPFV SHGSTPSSDS CLELSVGRNG  240
LGSLSTINDS IPMGLNLGDG LFSAGPMVPI TKPGIGMPGN DTPLERTIYV DLALAAMNEL  300
VKMAQMDGPL WIKSRDGGGR ETLNLDEYSR TFPSSARMKH RNWTTEATRD NTMLIINSLA  360
LVETLMDANR WAEMFPCLIA RATTVDVISS GMGGTRNGAL QVIHAELRVL SPLVPVRTLK  420
FLRFCKQHAD GLWAVVDVSI DFSGEGSDSH SFFSCRRLPS GCVVQDMPNG FSKVTWVEHT  480
EYDETVMHQL YRRLISSGIG FGAQRWLATL QRQCDCLAIL MSSTIHTEDS AGISPCGRRS  540
MLKLSQRMVD NFCSGICTST LHKWDKLVVG NISEDVKVMA RKSIDDPGEP PGIVLSASTS  600
VWMPVAQQRL FAFLQNEHLR SEWDILSNGR PMLEMLHISK GQGLDNRVSL LRANPMNANE  660
STMLILQETW TDISGSLVVY APVDTASVNL VMRGGDSTYV SLLPSGFAIL PDGLSSYACT  720
NNGKDASVTS DIKIGHSGGC LLTVAFQILV NSLPTAKLTV ESVETVNNLI SCTIQKIKTS  780
LEVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein