PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022141193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25960.1 Da PI: 5.1528 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.8 | 1.6e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +rienk nrqvtfskRrng+lKKA+ELSvLCd++va+iif s+gkl+e+ss XP_022141193.1 9 ERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSS 59 69***********************************************96 PP | |||||||
2 | K-box | 82.6 | 8.7e-28 | 82 | 171 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 l+e++ +e++kL++++e+Lqr++R++lGe+Le+L+lkeL++Le+qL+k l++ R++K e++l+ + el+k+e++l ++n++L++klee XP_022141193.1 82 LDESDV--QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEE 171 444433..368******************************************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MGRGKVVLER IENKVNRQVT FSKRRNGLLK KAYELSVLCD VDVALIIFYS RGKLFEFSST 60 DMNKILERYH QRCYSSGSTS NLDESDVQIE EVSKLRAKYE SLQRSHRNFL GEELEPLNLK 120 ELHNLEKQLD KTLSQARQRK AEIMLQRLAE LRKMEQDLGD QNTELKSKLE EGQRRLQQSE 180 DGQGDPEEQV PNYEVVGEEP NMSSRCFDVQ EEEEARAAMA GGRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45650.1 | 5e-64 | MIKC_MADS family protein |