PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022141193.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 224aa    MW: 25960.1 Da    PI: 5.1528
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022141193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.81.6e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +rienk nrqvtfskRrng+lKKA+ELSvLCd++va+iif s+gkl+e+ss
  XP_022141193.1  9 ERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSS 59
                    69***********************************************96 PP

2K-box82.68.7e-28821719100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     l+e++     +e++kL++++e+Lqr++R++lGe+Le+L+lkeL++Le+qL+k l++ R++K e++l+ + el+k+e++l ++n++L++klee
  XP_022141193.1  82 LDESDV--QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEE 171
                     444433..368******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGRGKVVLER IENKVNRQVT FSKRRNGLLK KAYELSVLCD VDVALIIFYS RGKLFEFSST  60
DMNKILERYH QRCYSSGSTS NLDESDVQIE EVSKLRAKYE SLQRSHRNFL GEELEPLNLK  120
ELHNLEKQLD KTLSQARQRK AEIMLQRLAE LRKMEQDLGD QNTELKSKLE EGQRRLQQSE  180
DGQGDPEEQV PNYEVVGEEP NMSSRCFDVQ EEEEARAAMA GGRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.15e-64MIKC_MADS family protein