PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022140979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB_related | ||||||||
Protein Properties | Length: 265aa MW: 29960 Da PI: 9.0726 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.4 | 1.3e-11 | 30 | 74 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ ++++++a++++ + Wk+I + +g +t q++s+ qky XP_022140979.1 30 RESWTEPQHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MALPFDTATT SSREDLWKRA RKPYTITKCR ESWTEPQHDK FLEAIQLFDR DWKKIEAFVG 60 SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAAHPY PQKASKNALA LVSGSFQSSS 120 VEPKYILKPD SSSVPASFIS AAAMSSRADN SIQTVNFSQG QITDNNCCSS TERIPRASFP 180 TKSIIEEQNN HQLRVLPDFG QVYNFIGSVF DPEATDHLQR LKKMDPIDVE TVLLLMRNLS 240 INLASPDFED HKKVLSSYDV FMEHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 1e-100 | MYB_related family protein |