PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022140853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 200aa MW: 22808.4 Da PI: 9.7807 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.5 | 2.4e-30 | 12 | 62 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCda++aviifs++g+lye++s XP_022140853.1 12 KRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFAS 62 79***********************************************86 PP | |||||||
2 | K-box | 65.7 | 1.7e-22 | 84 | 175 | 7 | 98 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 k ++ + ++l++e++ + ++ie q +qR+llG +L+s+sl eLq++ qL++sl iR++K +l++eqie+l++ke+ l e+n +L+ k XP_022140853.1 84 KIDKQLQLQELKNEAESISEKIELVQLSQRKLLGYGLDSCSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQLKEKERLLLEKNARLSLKA 175 33677789*******************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MAEMVRGKVE MKRIENATSR QVTFSKRRNG LLKKAYELSV LCDAQIAVII FSQKGRLYEF 60 ASSDIQRIVE RYRKCARDGK NNSKIDKQLQ LQELKNEAES ISEKIELVQL SQRKLLGYGL 120 DSCSLDELQE IDAQLQRSLF LIRARKAQLY KEQIEQLKEK ERLLLEKNAR LSLKAAAHGG 180 AAALGCRSSP SCEVDTQLFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 2e-67 | MIKC_MADS family protein |