PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022140692.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 714aa    MW: 78541.9 Da    PI: 5.536
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022140692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2060116157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  XP_022140692.1  60 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 116
                     688999************************************************995 PP
2START218.32.5e-682444641206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+ +ep+W++      + +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_022140692.1 244 ELAVAAMEELTRMAQMGEPLWMTALdgstSVLNEDEYLRTFPRGIGpkpsgFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 337
                     57899********************999999************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq++++e+q++splvp R++++vRy++q+ +g+w++vdvS+d  ++ p    + R++++pSg+li++++ng+skvtwvehv
  XP_022140692.1 338 EVLSTGvagnynGALQVITSEFQVPSPLVPtRESYYVRYCKQHADGTWAVVDVSLDDLRPTP----GLRCRRRPSGCLIQEMPNGYSKVTWVEHV 428
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wv tl+rqce+
  XP_022140692.1 429 EVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCER 464
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    
MFQPSMMDGQ LLPLDMPHNT SESDLARIRD DDFDSATKSG SDNNHELASG DDQDPRPNKK  60
KRYHRHTQHQ IQEMEAFFKE CPHPDDKQRK ELSRELGLEP LQVKFWFQNK RTQMKNQHER  120
HENTQLRTEN EKLRADNMRY REALSNASCP NCGGPTAIGE MSFDEHHLRL ENARLREEID  180
RISAIAAKYV GKPVVNYPLL SPPVPSRPLE LGMGNFGGDI YGSAGDLIRS ISAPTEADKP  240
MIIELAVAAM EELTRMAQMG EPLWMTALDG STSVLNEDEY LRTFPRGIGP KPSGFKCEAS  300
RESAVVIMNH INLVEILMDV NQWSTLFSGI VSRAMTLEVL STGVAGNYNG ALQVITSEFQ  360
VPSPLVPTRE SYYVRYCKQH ADGTWAVVDV SLDDLRPTPG LRCRRRPSGC LIQEMPNGYS  420
KVTWVEHVEV DDRGVHNLYK QLVSSGQAFG AKRWVTTLDR QCERLASAMA TNIPTGDVGV  480
ITSQEGRKSM LKLAERMVIS FCAGVSASTT HTWTTLSGTG ADDVRVMTRK SIDDPGRPPG  540
IVLSAATSFW LPVPPKRIFD FLRDENSRSE WDILSNGGVV QEMAHIANGR DTGNCVSLLR  600
VNSANSSQSN MLILQESCTD PTASFVIYAP VDIVAMNVVL NGGDPDYVAL LPSGFAILPD  660
GGGGEGGSLL TVAFQILVDS VPTAKLSLGS VATVNNLIAC TVERIKASLS CDTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein