PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140675.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 287aa MW: 32057 Da PI: 9.1153

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++ +G+g +W + +++ g++R++k+c++rw++yl XP_022140675.1 14 KGPWSPEEDSQLKHYIETYGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.8	1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022140675.1 69 GEFSAEEDRIICTLFATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSQLKHYIE TYGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSAEEDRIIC TLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 MASPPPSTIP PQIIKKTQSL ISPSHQNAPF HPQSNNIFNP SSPSPSIPFN YHSNPISGSC 180 NLATYPFGFD HPYEQTLKSN HQFQYCTSSG GGGHGYSPKM GVEFGSGLVS SNGFEGNNQG 240 KLMNNYGDGN FGENYDKWVI SHSNSSSNNN GMMMLNVEEQ KKYCYYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-76	MYB family protein