PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140300.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 269aa MW: 30191.1 Da PI: 9.7863

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	105.1	9e-33	40	181	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 lp+G++F+Ptd++l+ ++L+ kv g + ++++ i+ +i++++P++Lp v+++ +fF++ +k+y+tgkrk+r+ + XP_022140300.1 40 LPAGVKFDPTDQQLL-QHLEGKVVGCDyahslIHEFIPtIQWDqGICYTHPQKLP-GVQKDGLVRHFFHRPSKAYTTGKRKRRKvhaedtdgEGD 132 799**********.9999999776442222222443336******.666667788**************856666544337 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+++vl+ +g+++g kk+Lv+y g+++k+ekt+W+mh+y+l XP_022140300.1 133 TRWHKTGKTRPVLV-GGRVKGYKKILVLYtnYGKQRKPEKTNWIMHQYHL 181 78********.9*********6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MTHQECGLQY TQIIKSCPSC GHQIKCPQNQ KGGIHTLPGL PAGVKFDPTD QQLLQHLEGK 60 VVGCDYAHSL IHEFIPTIQW DQGICYTHPQ KLPGVQKDGL VRHFFHRPSK AYTTGKRKRR 120 KVHAEDTDGE GDTRWHKTGK TRPVLVGGRV KGYKKILVLY TNYGKQRKPE KTNWIMHQYH 180 LGSSEEEKDG EIVVSKVFYQ TQPRQCGVTK DSISLKFRGQ KINNGHELGS NPNPAVDFYN 240 PSFISFQPSD QNRSGGNSFA VHGGSSVVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	121	KRKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-105	NAC family protein