PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022140118.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 336aa MW: 38142.4 Da PI: 5.8654

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022140118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d++++ G g+W+t ++ g+ R++k+c++rw +yl XP_022140118.1 14 KGPWTPEEDQKLMDYIQKNGHGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.8	9.3e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia ++ gRt++++k++w+++ XP_022140118.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIATQLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MGRTPCCDKN GLKKGPWTPE EDQKLMDYIQ KNGHGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIATQLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSILR STLYNSSQMN LSNLLGVQPL VNPELLKLAA SLMSSDQRKS 180 PSFSPQNSSH AIQFSRPQLQ QIMQVPNLQE IVQYPEEATT QLVEPIGSEL NDQWQSGSIL 240 PSNLSQECDF VDHLPSFDYC GLDHSYETTT FGSHNXNNNQ NFSLASVLSS PSSSSPTQMN 300 SNSSTYFTSA TEDERESYCS QMLDFEISDI FNEGFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-97	MYB family protein