PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139894.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 330aa    MW: 36187.9 Da    PI: 9.0155
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.81.8e-52211481128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yL++k+++++l++  +i+++d+yk++PwdLp k+  +++ewyfF++r++ky++g r+nra+ sgyWkatg+dk+++++
  XP_022139894.1  21 LPPGFRFHPTDEELVVHYLTRKLSSSPLPA-PIIADLDLYKFDPWDLPGKAVFGKQEWYFFTPRERKYPNGARPNRAAISGYWKATGTDKPIMTS 114
                     79***************************9.88***************77777899*************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kk Lvfy gr pkg+kt+W+mheyrl
  XP_022139894.1 115 nGTHKVGVKKALVFYGGRPPKGVKTNWIMHEYRL 148
                     67788***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDPDYIESTD SSSNASSHLQ LPPGFRFHPT DEELVVHYLT RKLSSSPLPA PIIADLDLYK  60
FDPWDLPGKA VFGKQEWYFF TPRERKYPNG ARPNRAAISG YWKATGTDKP IMTSNGTHKV  120
GVKKALVFYG GRPPKGVKTN WIMHEYRLLH APNNSNNNPT NPKPSLKLDD WVLCRIYMKN  180
PAQASTIMEE LSRVPLKPVA SGGHKGGGNC YLDVGVLSSD GDDIIHQNAS NISELPSSSC  240
SSKATKRGLP CQLWNGGGAK QLRLDLINSY SSGVTSGAEE NTVSYVSLLN QLPVQNAAFQ  300
VQPSAPLLGS LGDGVLRQHF QLPTNINWNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.15e-90NAC family protein