PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022139885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28066.7 Da PI: 9.7536 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.1 | 3.6e-31 | 23 | 72 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+ XP_022139885.1 23 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 72 79***********************************************8 PP | |||||||
2 | K-box | 112.8 | 3.3e-37 | 92 | 187 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s s++ea+a+ +qqe+akL+++i nLq+ +RhllG++++sLs+k+L++Le +Lek++++iRs+Knell+++ie++qk+e el+++n+ Lr+k++ XP_022139885.1 92 SAGSVSEANAQFYQQESAKLRSQIGNLQNLNRHLLGDSISSLSVKDLKSLEVKLEKGISRIRSRKNELLFAEIEYMQKREVELHNNNQLLRAKIA 186 556699***************************************************************************************98 PP K-box 100 e 100 e XP_022139885.1 187 E 187 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MAYPDERQVE QQRRSGRGKI EIKRIENTTN RQVTFCKRRN GLLKKAYELS VLCDAEVALV 60 VFSSRGRLYE YANNSVRATI SRYKKACSDP SSAGSVSEAN AQFYQQESAK LRSQIGNLQN 120 LNRHLLGDSI SSLSVKDLKS LEVKLEKGIS RIRSRKNELL FAEIEYMQKR EVELHNNNQL 180 LRAKIAESDR NQQNQNPSTA MGEGGAPNFE QYDSRNYFQL NNHISLQLVR RGSLYCGCFC 240 SIELSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-107 | MIKC_MADS family protein |